T1 MRI partial volume estimation

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Inheritance graph

Defined in file : brainvisa/toolboxes/spm/types/MRI_spm.py

Used in the following processes

spm8 - VBM Segmentation

Associated formats

BrainVISA volume formats
NIFTI-1 image

Associated ontology rules

  • brainvisa-3.0 :
    • {center}/{subject}/{analysis}/{acquisition}/using_LDW_from_t1mri_to_{template}/<subject>_PVE
    {center}/{subject}/{analysis}/{acquisition}/using_LDW_from_t1mri_to_{template}/<subject>_PVE_rigid_registered
    {center}/{subject}/{analysis}/{acquisition}/using_LDW_from_t1mri_to_{template}/<subject>_PVE_affine_registered
    {center}/{subject}/{analysis}/{acquisition}/using_LDW_from_t1mri_to_{template}/<subject>_PVE_warped_without_modulation
    {center}/{subject}/{analysis}/{acquisition}/using_HDW_from_t1mri_to_{template}/<subject>_PVE_warped_without_modulation
  • brainvisa-3.1.0 :
    • {center}/{subject}/{analysis}/{acquisition}/using_LDW_from_t1mri_to_{template}/<subject>_PVE
    {center}/{subject}/{analysis}/{acquisition}/using_LDW_from_t1mri_to_{template}/<subject>_PVE_rigid_registered
    {center}/{subject}/{analysis}/{acquisition}/using_LDW_from_t1mri_to_{template}/<subject>_PVE_affine_registered
    {center}/{subject}/{analysis}/{acquisition}/using_LDW_from_t1mri_to_{template}/<subject>_PVE_warped_without_modulation
    {center}/{subject}/{analysis}/{acquisition}/using_HDW_from_t1mri_to_{template}/<subject>_PVE_warped_without_modulation
  • brainvisa-3.2.0 :
    • {center}/{subject}/spm/spm12Segment/{acquisition}/{analysis}_LDW_from_t1mri_to_{template}/<subject>_PVE
    {center}/{subject}/spm/spm12Segment/{acquisition}/{analysis}_LDW_from_t1mri_to_{template}/<subject>_PVE_rigid_registered
    {center}/{subject}/spm/spm12Segment/{acquisition}/{analysis}_LDW_from_t1mri_to_{template}/<subject>_PVE_affine_registered
    {center}/{subject}/spm/spm12Segment/{acquisition}/{analysis}_LDW_from_t1mri_to_{template}/<subject>_PVE_warped_without_modulation
    {center}/{subject}/spm/spm12Segment/{acquisition}/{analysis}_HDW_from_t1mri_to_{template}/<subject>_PVE_warped_without_modulation
    {center}/{subject}/spm/spm8VBMSegmentation/{acquisition}/{analysis}_LDW_from_t1mri_to_{template}/<subject>_PVE
    {center}/{subject}/spm/spm8VBMSegmentation/{acquisition}/{analysis}_LDW_from_t1mri_to_{template}/<subject>_PVE_rigid_registered
    {center}/{subject}/spm/spm8VBMSegmentation/{acquisition}/{analysis}_LDW_from_t1mri_to_{template}/<subject>_PVE_affine_registered
    {center}/{subject}/spm/spm8VBMSegmentation/{acquisition}/{analysis}_LDW_from_t1mri_to_{template}/<subject>_PVE_warped_without_modulation
    {center}/{subject}/spm/spm8VBMSegmentation/{acquisition}/{analysis}_HDW_from_t1mri_to_{template}/<subject>_PVE_warped_without_modulation
    {center}/{subject}/spm/spm8NewSegment/{acquisition}/{analysis}_LDW_from_t1mri_to_{template}/<subject>_PVE
    {center}/{subject}/spm/spm8NewSegment/{acquisition}/{analysis}_LDW_from_t1mri_to_{template}/<subject>_PVE_rigid_registered
    {center}/{subject}/spm/spm8NewSegment/{acquisition}/{analysis}_LDW_from_t1mri_to_{template}/<subject>_PVE_affine_registered
    {center}/{subject}/spm/spm8NewSegment/{acquisition}/{analysis}_LDW_from_t1mri_to_{template}/<subject>_PVE_warped_without_modulation
    {center}/{subject}/spm/spm8NewSegment/{acquisition}/{analysis}_HDW_from_t1mri_to_{template}/<subject>_PVE_warped_without_modulation

    Key attributes

  • brainvisa-3.0 :
    • center ,  subject ,  analysis ,  acquisition ,  template ,  transformation ,  warping_method
  • brainvisa-3.1.0 :
    • center ,  subject ,  analysis ,  acquisition ,  template ,  transformation ,  warping_method
  • brainvisa-3.2.0 :
    • center ,  subject ,  acquisition ,  analysis ,  template ,  transformation ,  warping_method ,  processing